You can also see my publications at my Google Scholar profile.
Wang, J. L., Duboc, C., Wu, Q., Ochi, T., Liang, S., Tsutakawa, S. E., Lees-Miller, S. P., Nadal, M. Tainer, J. A., Blundell, T. L., and Strick, T. R. Dissection of DNA double-strand-break repair using novel single-molecule forceps. Nature Structural & Molecular Biology 25, 482-487.
Liang, S., Esswein, S. R., Ochi, T., Wu, Q., Ascher, D. B., Chirgadze, D., Sibanda, B. L. and Blundell, T. L. Achieving selectivity in space and time with DNA double-strand-break response and repair: molecular stages and scaffolds come with strings attached. Structural Chemistry 28, 161-171.
Chang, H. H. Y., Watanabe, G., Gerodimos, C. A., Ochi, T., Blundell, T. L., Jackson, S. P. and Lieber, M. R. Different DNA End Configurations Dictate Which NHEJ Components Are Most Important for Joining Efficiency. J. Biol. Chem. 291, 24377-24389.
Wu, Q., Paul, A., Mehmood, S., Su, D., Ochi, T., Robinson, C. V., Wang, B. and Blundell, T. L. Phosphorylated Abraxas promotes dimerization and accumulation of BRCA1 at DNA damage sites. Mol. Cell 61, 1-15.
Ascher, D. B., Jubb, H. C., Pires, D. E. V., Ochi, T., Higueruelo, A. and Blundell, T. L. Protein-Protein Interactions: Structures and Druggability. Multifaceted Roles of Crystallography in Modern Drug Discovery. NATO Science for Peace and Security Series A: Chemistry and Biology. Springer Netherlands, Dordrecht, Ch. 12, 141-163.
Murray, J. E., van der Burg, M., IJspeert, H., Carroll, P., Wu, Q., Ochi, T., Leitch, A., Miller, E. S., Kysela, B., Jawad, A., Bottani, A., Brancati, F., Cappa, M., Cormier-Daire, V., Deshpande, C., Faqeih, E. A., Graham, G., Ranza, E., Blundell, T. L., Jackson, A. P., Stewart, G. S., Bicknell, L. S. Mutations in the NHEJ component XRCC4 cause primordial dwarfism. AJHG 96, 412-424.
Ochi, T., Blackford, A. N., Coates, J., Jhujh, S., Mehmood, S., Tamura, N., Travers, J., Wu, Q., Draviam, V. M., Robinson, C. V., Blundell T. L. and Jackson S. P. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair. Science 347, 185-188.
Ochi, T., Wu, Q. and Blundell, T. L. The spatial organization of non-homologous end joining: From Bridging to end joining. DNA Repair 17, 98-109.
Ochi, T., Gu, X. and Blundell, T. L. Structure of the catalytic region of DNA ligase IV in complex with an Artemis fragment sheds light on Double-Strand Break Repair. Structure 21, 1-8.
Ochi, T., Wu, Q., Chirgadze, D. Y., Grossmann, J. G., Bolanos-Garcia, V. M. and Blundell, T. L. Structural insights into the role of domain flexibility in human DNA ligase IV. Structure 20, 1212-1222.
Bolanos-Garcia, V. M., Wu, Q., Ochi, T., Chirgadze, D. Y., Sibanda, B. L. and Blundell, T. L. Spatial and temporal organization of multi-protein assemblies: achieving sensitive control in information-rich cell-regulatory systems. Phil. Trans. R. Soc. A. 370, 3023-3039.
Wu, Q., Sibanda, B. L., Ochi, T., Bolanos-Garcia, V. M., Blundell, T. L. and Chirgadze, D. Y. Spatial and temporal organisation of multiprotein systems of cell regulation and signalling: What can we learn from NHEJ system of Double-Strand break repair? Macromolecular Crystallography. NATO Science for Peace and Security Series A: Chemistry and Biology. Springer Netherlands, Dordrecht, Ch. 1, 1-31.
Wu, Q., Ochi, T., Matak-Vinkovic, D., Robinson C. V., Chirgadze, D. Y. and Blundell, T. L. Non-homologous end-joining partners in a helical dance: structural studies of XLF-XRCC4 interactions. Biochem. Soc. Trans. 39, 1387-92.
Ochi, T, Sibanda, B. L., Wu, Q., Chirgadze, D. Y., Bolanos-Garcia, V. M. and Blundell, T. L. Structural Biology of DNA Repair: Spatial Organisation of the Multicomponent Complexes of Nonhomologous End Joining. Journal of Nucleic Acids, 2010, 1-19.
Ochi, T., Bolanos-Garcia, V. M., Stojanoff, V. and Moreno, A. Perspectives on protein crystallization. Progress in Biophysics and Molecular Biology 101, 56-63.
Surade, S., Ochi, T., Nietlispach, D., Chirgadze, D. and Moreno, A. Investigations into Protein Crystallization in the Presence of a Strong Magnetic Field. Crystal Growth and Design 10, 691-699.
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